Stem-loop cbr-mir-71

Accession

MI0000511

Description

Caenorhabditis briggsae cbr-mir-71 precursor miRNA mir-71

Gene
family

RF00832; mir-71

Sequence

agcugaacgaUGAAAGACAUGGGUAGUGAgacgucggagccucgucguaucacuauucuguuuuucgccgaucaguc
.(((((.((.(((((((((.(((((((((.(((.(((....))).))).)))))))))))))))))).)).))))).

Structure

a     a  a         U         g   u   a 
 gcuga cg UGAAAGACA GGGUAGUGA acg cgg g
 ||||| || ||||||||| ||||||||| ||| |||  
 ugacu gc gcuuuuugu cuuaucacu ugc gcu c
c     a  c         -         a   u   c 

Annotation confidence Low

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrI: 2725611-2725687 [-]

Mature cbr-miR-71

• Accession: MIMAT0000481
• Description: Caenorhabditis briggsae cbr-miR-71 mature miRNA
• Sequence: 11 - UGAAAGACAUGGGUAGUGA - 29
• Evidence: not_experimental

References

1. PubMed ID: 11679671
   An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
   "Lau NC, Lim LP, Weinstein EG, Bartel DP"
   "Science (2001) 294:858-862