Accession
MI0000512
Description
Caenorhabditis briggsae
cbr-mir-73a precursor miRNA
Sequence
137568
reads,
12654.0
reads per million, 3 experiments
cggucccucaaacaacCGAGCUUCCCCGUCAAGCCACAGCuaucucugacauugcUGGCAAGAUGUUGGCAGUUCAGUuguaugacggagacca
.(((((((((.(((((.(((((.((.((((..((((..((.............))))))..))))..)).))))).))))).))).)).)))).
.(((((((((.(((((.(((((.((.((((..((((..((.............))))))..))))..)).))))).))))).))).)).)))).
Structure
c - - a C U -C AA CA uaucu gguc cc uca acaac GAGCU CC CGUC GCCA GC c |||| || ||| ||||| ||||| || |||| |||| || u ccag gg agu uguUG CUUGA GG GUAG CGGU cg g a a c a A C UU AA -- uuaca
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrX: 4426887-4426980 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cbr-mir-73a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-73a-5p
| Accession | MIMAT0053530 |
| Description | Caenorhabditis briggsae cbr-miR-73a-5p mature miRNA |
| Sequence | 17 - CGAGCUUCCCCGUCAAGCCACAGC - 40 |
| Evidence | not_experimental |
Mature cbr-miR-73a-3p
| Accession | MIMAT0000482 |
| Description | Caenorhabditis briggsae cbr-miR-73a-3p mature miRNA |
| Sequence | 56 - UGGCAAGAUGUUGGCAGUUCAGU - 78 |
| Evidence | not_experimental |
References
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