Stem-loop cbr-mir-74a

Accession

MI0000513

Description

Caenorhabditis briggsae cbr-mir-74a precursor miRNA mir-74

Gene
family

RF00830; mir-74

Sequence

cgcacuuuugggcuuccauaucuuucccagcuccucucauuuacuauggaugcUGGCAAGAAAUGGCAGUCUAGAugugca
.((((.((((((((.((((.((((..((((((((.............))).))))).)))).)))).)))))))).)))).

Structure

c    u        u    a    uc     -   ucuca 
 gcac uuugggcu ccau ucuu  ccagc ucc     u
 |||| |||||||| |||| ||||  ||||| |||     u
 cgug AGAUCUGA GGUA AGAA  GGUcg agg     u
a    u        C    A    -C     u   uauca 

Annotation confidence Low

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrX: 4426602-4426682 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cbr-mir-74a

Mature cbr-miR-74a

• Accession: MIMAT0000483
• Description: Caenorhabditis briggsae cbr-miR-74a mature miRNA
• Sequence: 54 - UGGCAAGAAAUGGCAGUCUAGA - 75
• Evidence: not_experimental

References

1. PubMed ID: 11679671
   An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
   "Lau NC, Lim LP, Weinstein EG, Bartel DP"
   "Science (2001) 294:858-862