Stem-loop cbr-mir-252

Accession

MI0000539

Description

Caenorhabditis briggsae cbr-mir-252 precursor miRNA

Sequence

aggucucucccaguuaUAAGUAGUAGUGCCGCAGGUAACcgcuuccagaaaauugguuuaccuacugccuucugcuuagaauugggauuuugaugaccg
.((((((((((((((.(((((((.((.((.(.(((((((((.((......)).))).)))))).).)))).))))))).))))))))....)).)))).

Structure

a    -  ----        a       U  U  C C      -   c  cc 
 gguc uc    ucccaguu UAAGUAG AG GC G AGGUAA Ccg uu  a
 |||| ||    |||||||| ||||||| || || | |||||| ||| ||   
 ccag ag    aggguuaa auucguc uc cg c uccauu ggu aa  g
g    u  uuuu        g       u  -  u a      u   u  aa 

Annotation confidence Not enough data

Comments

This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.

Genome context

chrII: 8309576-8309674 [-]

Mature cbr-miR-252

• Accession: MIMAT0000507
• Description: Caenorhabditis briggsae cbr-miR-252 mature miRNA
• Sequence: 17 - UAAGUAGUAGUGCCGCAGGUAAC - 39
• Evidence: not_experimental

References