Accession
MI0000546
Symbol
MGI:
Mir19b-2
Description
Mus musculus
mmu-mir-19b-2 precursor miRNA mir-19
Gene
family?
family?
RF00245;
mir-19
Literature search
124 open access papers mention mmu-mir-19b-2
(755 sentences)
(755 sentences)
Sequence
232540
reads,
2410
reads per million, 107 experiments
acuuacgauuAGUUUUGCAGAUUUGCAGUUCAGCguauaugugaauauauggcUGUGCAAAUCCAUGCAAAACUGAuuguggga
.((((((((((((((((((((((((((...((((((((((....)))))).))))))))))))..)))))))))))))))))).
.((((((((((((((((((((((((((...((((((((((....)))))).))))))))))))..)))))))))))))))))).
Structure
a -- GUU - g cuuacgauuAGUUUUGCA GAUUUGCA CAGC guauau u |||||||||||||||||| |||||||| |||| |||||| ggguguuAGUCAAAACGU CUAAACGU GUcg uauaua g a AC --- g a
Annotation confidence
High
Do you think this miRNA is real?
Comments
Mouse miR-19b was cloned from mouse tissues by independent groups [1,2]. There are two predicted hairpin precursors, with closely related human homologues [4]: mir-19b-1 (MIR:MI0000718) on chromosome 14, and mir-19b-2 (previously named mir-19b here, MIR:MI0000546) on mouse chromosome X.
Genome context
chrX: 52741983-52742066 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from mmu-mir-19b-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mmu-miR-19b-2-5p
| Accession | MIMAT0017010 |
| Description | Mus musculus mmu-miR-19b-2-5p mature miRNA |
| Sequence | 11 - AGUUUUGCAGAUUUGCAGUUCAGC - 34 |
| Evidence |
experimental
Illumina [7] |
Mature mmu-miR-19b-3p
| Accession | MIMAT0000513 |
| Description | Mus musculus mmu-miR-19b-3p mature miRNA |
| Sequence | 54 - UGUGCAAAUCCAUGCAAAACUGA - 76 |
| Evidence |
experimental
cloned [1-3,5], Northern [2], Illumina [6,8] |
| Database links |
|
| Predicted targets |
|
References
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