Stem-loop mmu-mir-331

Accession

MI0000609

Symbol

MGI: Mir331

Description

Mus musculus mmu-mir-331 precursor miRNA mir-331

Gene
family

RF00769; mir-331

Literature search

24 open access papers mention mmu-mir-331
(149 sentences)

Sequence

28885 reads, 177 reads per million, 104 experiments

gagucugguuuuguuuggguuuguuCUAGGUAUGGUCCCAGGGAUCCcagaucaaaccagGCCCCUGGGCCUAUCCUAGAAccaaccuaaacccgu
.....(((....(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))))).

Structure

gaguc   uuuu         u        U    U       AUC  agau 
     ugg    guuuggguu guuCUAGG AUGG CCCAGGG   Cc    c
     |||    ||||||||| |||||||| |||| |||||||   ||    a
     gcc    caaauccaa cAAGAUCC UAUC GGGUCCC   Gg    a
----u   ----         c        -    C       --C  acca 

Annotation confidence Not enough data

Genome context

chr10: 93963768-93963863 [-]

Mature mmu-miR-331-5p

• Accession: MIMAT0004643
• Description: Mus musculus mmu-miR-331-5p mature miRNA
• Sequence: 26 - CUAGGUAUGGUCCCAGGGAUCC - 47
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-331-3p

• Accession: MIMAT0000571
• Description: Mus musculus mmu-miR-331-3p mature miRNA
• Sequence: 61 - GCCCCUGGGCCUAUCCUAGAA - 81
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009