Stem-loop rno-mir-335

Accession

MI0000612

Description

Rattus norvegicus rno-mir-335 precursor miRNA

Literature search

148 open access papers mention rno-mir-335
(474 sentences)

Sequence

226471 reads, 188.0 reads per million, 484 experiments

ucuuuugggcgggggUCAAGAGCAAUAACGAAAAAUGUUuguuuuucguaaaccgUUUUUCAUUAUUGCUCCUGACCUccucucauuuguuauagcca
.....((((.((((((((.(((((((((.((((((((...((((.....)))))))))))).))))))))).)))))))).)))).............

Structure

--------ucuuu    c        A         C        UUu    u 
             uggg gggggUCA GAGCAAUAA GAAAAAUG   guuu u
             |||| |||||||| ||||||||| ||||||||   |||| c
             acuc ccUCCAGU CUCGUUAUU CUUUUUgc   caaa g
accgauauuguuu    u        C         A        ---    u 

Annotation confidence High

Genome context

Unknown

Mature rno-miR-335-5p

• Accession: MIMAT0000575
• Description: Rattus norvegicus rno-miR-335-5p mature miRNA
• Sequence: 16 - UCAAGAGCAAUAACGAAAAAUGUU - 39
• Evidence: experimental ; cloned [1-2], Northern [1]

Mature rno-miR-335-3p

• Accession: MIMAT0061418
• Description: Rattus norvegicus rno-miR-335-3p mature miRNA
• Sequence: 56 - UUUUUCAUUAUUGCUCCUGACCU - 78
• Evidence: experimental ; cloned [1-2], Northern [1]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 14691248
   Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
   "Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G"
   "Proc Natl Acad Sci U S A (2004) 101:360-365