Stem-loop rno-mir-349

Accession

MI0000636

Description

Rattus norvegicus rno-mir-349 precursor miRNA

Literature search

1 open access papers mention rno-mir-349
(5 sentences)

Sequence

2 reads, 1 reads per million, 2 experiments

gaagacucuagcauguaagguugggggagggggcugugucuagcaagucuucuucccccaCAGCCCUGCUGUCUUAACCUCUagguguuccggcucc
..((.((..(((((.(((((((((((.(((((((((((....(.(((....))))...))))))))).)).))))))))).)).)))))..))))..

Structure

ga  a  cu     g  -         g  -         ucua c   u 
  ag cu  agcau ua agguugggg ag ggggcugug    g aag c
  || ||  ||||| || ||||||||| || |||||||||    | |||  
  uc gg  uugug aU UCCAAUUCU UC UCCCGACac    c uuc u
cc  -  cc     g  C         G  G         -ccc -   u 

Annotation confidence Not enough data

Comments

Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1].

Genome context

chr7: 130146518-130146614 [-]

Mature rno-miR-349

• Accession: MIMAT0000599
• Description: Rattus norvegicus rno-miR-349 mature miRNA
• Sequence: 61 - CAGCCCUGCUGUCUUAACCUCU - 82
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 14691248
   Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
   "Kim J, Krichevsky A, Grad Y, Hayes GD, Kosik KS, Church GM, Ruvkun G"
   "Proc Natl Acad Sci U S A (2004) 101:360-365