Accession
MI0000687
Symbol
MGI:
Mir17
Description
Mus musculus
mmu-mir-17 precursor miRNA mir-17
Gene
family?
family?
RF00051;
mir-17
Literature search
321 open access papers mention mmu-mir-17
(3241 sentences)
(3241 sentences)
Sequence
283920
reads,
2249
reads per million, 107 experiments
gucagaauaauguCAAAGUGCUUACAGUGCAGGUAGugaugugugcaucuACUGCAGUGAGGGCACUUGUAGcauuaugcugac
(((((.(((((((..((((((((.((.(((((.....((((....))))..))))).)).))))))))...))))))).)))))
(((((.(((((((..((((((((.((.(((((.....((((....))))..))))).)).))))))))...))))))).)))))
Structure
a -CA A G GUAGu u
gucag auaaugu AAGUGCUU CA UGCAG gaug g
||||| ||||||| |||||||| || ||||| ||||
caguc uauuacG UUCACGGG GU ACGUC cuac u
g AUG A G ---Au g
Annotation confidence
High
Do you think this miRNA is real?
Comments
Mouse mir-17 is predicted [4] based on homology to a cloned miR from human (MIR:MI0000071) [1,2]. miRNAs derived from the 5' [1] and 3' [2] arms of the human mir-17 precursor have been reported. Landgraf et al. show that the 5' product is the predominant one [5]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5].
Genome context
chr14: 115043671-115043754 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mmu-mir-17
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mmu-miR-17-5p
| Accession | MIMAT0000649 |
| Description | Mus musculus mmu-miR-17-5p mature miRNA |
| Sequence | 14 - CAAAGUGCUUACAGUGCAGGUAG - 36 |
| Evidence |
experimental
cloned [5], Illumina [6-7] |
| Database links |
|
| Predicted targets |
|
Mature mmu-miR-17-3p
| Accession | MIMAT0000650 |
| Description | Mus musculus mmu-miR-17-3p mature miRNA |
| Sequence | 51 - ACUGCAGUGAGGGCACUUGUAG - 72 |
| Evidence |
experimental
cloned [3,5], Illumina [6-7] |
| Database links |
|
| Predicted targets |
|
References
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