Stem-loop mmu-mir-135a-2

Accession

MI0000715

Symbol

MGI: Mir135a-2

Description

Mus musculus mmu-mir-135a-2 precursor miRNA

Literature search

74 open access papers mention mmu-mir-135a-2
(507 sentences)

Sequence

102469 reads, 1765 reads per million, 74 experiments

agauaaauucacucuagugcuuUAUGGCUUUUUAUUCCUAUGUGAucguaauaaagucucaUGUAGGGAUGGAAGCCAUGAAauacauugugaaaauuca
.((....(((((....(((.((((((((((((.((((((((((((.(........)..)))))))))))))))))))))))).)))...)))))...)).

Structure

a  uaaa     ucua   c            U            -u gua 
 ga    uucac    gug uuUAUGGCUUUU AUUCCUAUGUGA  c   a
 ||    |||||    ||| |||||||||||| ||||||||||||  |    
 cu    aagug    cau AAGUACCGAAGG UAGGGAUGUacu  g   u
a  -uaa     -uua   a            -            cu aaa 

Annotation confidence High

Genome context

chr10: 92072086-92072185 [-]

Mature mmu-miR-135a-5p

• Accession: MIMAT0000147
• Description: Mus musculus mmu-miR-135a-5p mature miRNA
• Sequence: 23 - UAUGGCUUUUUAUUCCUAUGUGA - 45
• Evidence: experimental ; cloned [1,3], Illumina [4-5]

Mature mmu-miR-135a-2-3p

• Accession: MIMAT0017064
• Description: Mus musculus mmu-miR-135a-2-3p mature miRNA
• Sequence: 62 - UGUAGGGAUGGAAGCCAUGAA - 82
• Evidence: experimental ; Illumina [5]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12007417
   Identification of tissue-specific microRNAs from mouse
   "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
   "Curr Biol (2002) 12:735-739


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


5. PubMed ID: 15634332
   New human and mouse microRNA genes found by homology search
   "Weber MJ"
   "FEBS J (2005) 272:59-73