Accession
MI0000759
Description
Caenorhabditis elegans
cel-mir-360 precursor miRNA mir-360
Gene
family?
family?
RF00774;
mir-360
Literature search
5 open access papers mention cel-mir-360
(30 sentences)
(30 sentences)
Sequence
1660
reads,
18.0
reads per million, 74 experiments
cauucuguuaggaagcaucaaugugUUGUGACCGUUGUUACGGUCAAuuugcaaauugaaaaaaugACCGUAAUCCCGUUCACAAUAcauuguucguuuucuccaaaggu
...(((...(((((((..(((((((((((((.((..((((((((((.(((..........))).))))))))))..)).)))))))))))))...)))))))....))).
...(((...(((((((..(((((((((((((.((..((((((((((.(((..........))).))))))))))..)).)))))))))))))...)))))))....))).
Structure
cau -guu -au C UU A gcaa ucu aggaagc caaugugUUGUGA CG GUUACGGUCA uuu a ||| ||||||| ||||||||||||| || |||||||||| ||| gga ucuuuug guuacAUAACACU GC UAAUGCCAgu aaa u --u aacc cuu U CC a aagu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing. The 5' end of the mature sequence ws mapped by PCR, but the 3' ends have not been experimentally determined.
Genome context
chrX: 5919149-5919258 [+]
Database links
Mature cel-miR-360-5p
| Accession | MIMAT0015121 |
| Description | Caenorhabditis elegans cel-miR-360-5p mature miRNA |
| Sequence | 26 - UUGUGACCGUUGUUACGGUCAA - 47 |
| Evidence |
experimental
CLIPseq [3] |
| Database links |
|
Mature cel-miR-360-3p
| Accession | MIMAT0000702 |
| Description | Caenorhabditis elegans cel-miR-360-3p mature miRNA |
| Sequence | 67 - ACCGUAAUCCCGUUCACAAUA - 87 |
| Evidence |
experimental
cloned [1], PCR [1], Illumina [2], CLIPseq [3] |
References
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