Stem-loop rno-mir-7b

Accession

MI0000837

Description

Rattus norvegicus rno-mir-7b precursor miRNA

Literature search

44 open access papers mention rno-mir-7b
(87 sentences)

Sequence

64962 reads, 54.0 reads per million, 180 experiments

aggccagaacacaugagccaaugcuaugUGGAAGACUUGUGAUUUUGUUGUucugauaugauaugaCAACAAGUCACAGCCAGCCUCAUagaguggacucccaucaccuu
.(((((.......)).)))....(((((.((.....(((((((((.((((((.((......)).)))))))))))))))....)).))))).((((....))))......

Structure

aggccagaacacaugagccaaug     U  AAGAC         U      c  au 
                       cuaug GG     UUGUGAUUU GUUGUu ug  a
                       ||||| ||     ||||||||| |||||| ||   
                       gaUAC CC     GACACUGAA CAACag au  u
----uuccacuacccucagguga     U  -GACC         -      u  ag 

Annotation confidence High

Genome context

chr9: 10812432-10812541 [-]

Mature rno-miR-7b-5p

• Accession: MIMAT0000780
• Description: Rattus norvegicus rno-miR-7b-5p mature miRNA
• Sequence: 29 - UGGAAGACUUGUGAUUUUGUUGU - 51
• Evidence: experimental ; cloned [1]

Mature rno-miR-7b-3p

• Accession: MIMAT0052018
• Description: Rattus norvegicus rno-miR-7b-3p mature miRNA
• Sequence: 67 - CAACAAGUCACAGCCAGCCUCAU - 89
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414