Stem-loop rno-mir-190a-1

Accession

MI0000933

Description

Rattus norvegicus rno-mir-190a-1 precursor miRNA

Literature search

7 open access papers mention rno-mir-190a-1
(7 sentences)

Sequence

21610 reads, 18 reads per million, 446 experiments

ugcaggccucugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaACUAUAUAUCAAGCAUAUUCCUacagugucuugcc
.(((((.(.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).).))))).

Structure

u     c u     -U                UA     uuau 
 gcagg c cugug  GAUAUGUUUGAUAUAU  GGUug    u
 ||||| | |||||  ||||||||||||||||  |||||     
 cguuc g gacaU  UUAUACGAACUAUAUA  UCAac    u
c     u u     CC                --     cuaa 

Annotation confidence High

Genome context

chr8: 73030047-73030131 [-]

Mature rno-miR-190a-5p

• Accession: MIMAT0000865
• Description: Rattus norvegicus rno-miR-190a-5p mature miRNA
• Sequence: 15 - UGAUAUGUUUGAUAUAUUAGGU - 36
• Evidence: experimental ; SOLiD [2]

Mature rno-miR-190a-3p

• Accession: MIMAT0017145
• Description: Rattus norvegicus rno-miR-190a-3p mature miRNA
• Sequence: 51 - ACUAUAUAUCAAGCAUAUUCCU - 72
• Evidence: experimental ; SOLiD [2]

References

1. PubMed ID: 12554859
   New microRNAs from mouse and human
   "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
   "RNA (2003) 9:175-179


2. PubMed ID: 20403161
   Small RNA expression and strain specificity in the rat
   Linsen SE, de Wit E, de Bruijn E, Cuppen E
   BMC Genomics (2010) 11:249