Accession
MI0001012
Description
Arabidopsis thaliana
ath-MIR395f precursor miRNA
Literature search
25 open access papers mention ath-MIR395f
(106 sentences)
(106 sentences)
Sequence
auguccccuugaguucccuuaaacgcuucauuguucauacuuuguuaucaucuaucgaucgaucaaucaaucugaugaacaCUGAAGUGUUUGGGGGGACUCuaggugacau
(((((.(((.((((((((((((((((((((.(((((((...(((((((((((....))).))).)).)))....))))))).)))))))))))))))))))).))).)))))
(((((.(((.((((((((((((((((((((.(((((((...(((((((((((....))).))).)).)))....))))))).)))))))))))))))))))).))).)))))
Structure
c u u -acu - - - u
auguc ccu gaguucccuuaaacgcuuca uguucau uug uu auc auc a
||||| ||| |||||||||||||||||||| ||||||| ||| || ||| |||
uacag gga CUCAGGGGGGUUUGUGAAGU acaagua aac aa uag uag u
u u C gucu u c c c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1].
Genome context
chr1: 26273858-26273969 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ath-MIR395f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR395f
| Accession | MIMAT0000943 |
| Description | Arabidopsis thaliana ath-miR395f mature miRNA |
| Sequence | 82 - CUGAAGUGUUUGGGGGGACUC - 102 |
| Evidence |
experimental
5'RACE [1], Northern [1], PCR [1], MPSS [2], 454 [3], Illumina [4] |
References
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