Accession
MI0001066
Description
Epstein Barr virus
ebv-mir-BHRF1-3 precursor miRNA
Sequence
ucUAACGGGAAGUGUGUAAGCACAcacguaauuugcaagcggugcuucacgcucuucguuaaaau
..(((((((.((((((.((((((...(((.........))))))))))))))).)))))))....
..(((((((.((((((.((((((...(((.........))))))))))))))).)))))))....
Structure
--uc A U Aca aau
UAACGGG AGUGUG AAGCAC cgu u
||||||| |||||| |||||| ||| u
auugcuu ucgcac uucgug gcg g
uaaa c - --- aac
Annotation confidence
Low
Do you think this miRNA is real?
Comments
Pfeffer et al. cloned 5 miRNAs from a Burkitt's lymphoma cell line (BL41) infected with the B95-8 strain of Epstein-Barr virus [1]. They were all confirmed by Northern blot. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The ends of the miRNA may be offset with respect to previous annotations.
Genome context
HHV507799: 42966-43030 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ebv-mir-BHRF1-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
ebv-mir-BHRF1-3 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature ebv-miR-BHRF1-3
| Accession | MIMAT0000998 |
| Description | Epstein Barr virus ebv-miR-BHRF1-3 mature miRNA |
| Sequence | 3 - UAACGGGAAGUGUGUAAGCACA - 24 |
| Evidence |
experimental
cloned [1-2], Northern [1] |
References
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