Dead hairpin entry

Stem-loop ath-MIR405b

Accession

MI0001075

Description

Arabidopsis thaliana ath-MIR405b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention ath-MIR405b
(1 sentences)

Sequence

12408 reads, 105.0 reads per million, 184 experiments

uuaacccauuuaacaauucaacccaucaaaugaaaugaguuauggguuagacccaacucAUUUAACAAAAUGAGUUGGGUCUAACCCAUAACUcauuuaauuauaaacucauuugauuaugagu
...............(((((....(((((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))...........)))))))))..)))))

Structure

uuaacccauuuaaca     accc         -----------                              A 
               auuca    aucaaauga           aaugaguuauggguuagacccaacucAUUU A
               |||||    |||||||||           ||||||||||||||||||||||||||||||  
               ugagu    uaguuuacu           uuacUCAAUACCCAAUCUGGGUUGAGUAAA C
---------------     --au         caaauauuaau                              A