Dead hairpin entry

Stem-loop ath-MIR405d

Accession

MI0001077

Description

Arabidopsis thaliana ath-MIR405d precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention ath-MIR405d
(1 sentences)

Sequence

14923 reads, 110.0 reads per million, 183 experiments

acccaucaaaugAAAUGAGUUAUGGGUUGAcccaacucauuuuguuaaAUGAGUUGGGUCUAACCCAUAACUcauuuaaucauaaa
.........(((((((((((((((((((((((((((((((((....)))))))))))))).)))))))))))))))...))))...

Structure

acccaucaa    ---               -              u 
         augA   AAUGAGUUAUGGGUU GAcccaacucauuu g
         ||||   ||||||||||||||| ||||||||||||||  
         uacu   uuacUCAAUACCCAA CUGGGUUGAGUAaa u
------aaa    aau               U              u