Accession
MI0001079
Description
Arabidopsis thaliana
ath-MIR407 precursor miRNA
Sequence
10560
reads,
83.0
reads per million, 177 experiments
ugggaaaaauguuaaaaaaaucgccaacuuuuaaaaaugggacaaaaaaaucgccaacuccugaaaugucaUUUAAAUCAUAUACUUUUGGUugacuuuuccagaaagauaauaaagcaaagauucguaaucaacaaaacuuugcucuguuaucuuucuAAAGAACUCAAUCAAAAGUAUGUGAuuaaaacgacauuucaggaguuggugauuuuucaucccauuuuucaaaguuggcaauuuuuuugacauuuuuuccaaug
(((((((((((((((((((((.(((((((((.((((((((((...(((((((((((((((((((((((((.(((.((((((((((((((((((((.((((..((((((((((((.(((((((.((.((.....)).)).))))))).))))))))))))..)))).)))))))))))))))))))).))).)))))))))))))))))))))))))..)))))))))).))))))))).)))))))))))))))))))))...
(((((((((((((((((((((.(((((((((.((((((((((...(((((((((((((((((((((((((.(((.((((((((((((((((((((.((((..((((((((((((.(((((((.((.((.....)).)).))))))).))))))))))))..)))).)))))))))))))))))))).))).)))))))))))))))))))))))))..)))))))))).))))))))).)))))))))))))))))))))...
Structure
--- c u caa a A c cc a a c a ugggaaaaauguuaaaaaaau gccaacuuu aaaaauggga aaaaaucgccaacuccugaaauguc UUU AAUCAUAUACUUUUGGUuga uuuu agaaagauaaua agcaaag uu gu a ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||| ||||||| || || u accuuuuuuacaguuuuuuua cgguugaaa uuuuuacccu uuuuuagugguugaggacuuuacag aaa uuAGUGUAUGAAAACUAACU AAGA ucuuucuauugu ucguuuc aa ca c gua a c -ac c a C AA c a a a
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
MIR407a and MIR407b published by Sunkar and Zhu [1] map to the same locus on NC_003071.3.
Genome context
chr2: 13866205-13866467 [+]
Database links
Mature ath-miR407-5p
| Accession | MIMAT0001010 |
| Description | Arabidopsis thaliana ath-miR407-5p mature miRNA |
| Sequence | 72 - UUUAAAUCAUAUACUUUUGGU - 92 |
| Evidence |
experimental
cloned [1], Northern [1] |
Mature ath-miR407-3p
| Accession | MIMAT0053841 |
| Description | Arabidopsis thaliana ath-miR407-3p mature miRNA |
| Sequence | 160 - AAAGAACUCAAUCAAAAGUAUGUGA - 184 |
| Evidence |
experimental
unknown |
References
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