Accession
MI0001087
Description
Arabidopsis thaliana
ath-MIR164c precursor miRNA
Literature search
43 open access papers mention ath-MIR164c
(254 sentences)
(254 sentences)
Sequence
148777
reads,
786.0
reads per million, 183 experiments
uaacacuugAUGGAGAAGCAGGGCACGUGCgaacacaaaugaaaucgaucgguacuuguugaucauauuuucgCACGUGUUCUACUACUCCAACAcgugucu
..((((.((.(((((.((.((((((((((((((.....((((..(((((........)))))))))...)))))))))))))).)).))))).)).))))..
..((((.((.(((((.((.((((((((((((((.....((((..(((((........)))))))))...)))))))))))))).)).))))).)).))))..
Structure
ua u A A C cacaa aa cgg acac ug UGGAG AG AGGGCACGUGCgaa auga ucgau u |||| || ||||| || |||||||||||||| |||| ||||| ugug AC ACCUC UC UCUUGUGCACgcuu uacu aguug a uc c A A A --uua -- uuc
Annotation confidence
High
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR164 family [1]. It is predicted to target mRNAs coding for NAC domain transcription factors.
Genome context
chr5: 9852674-9852775 [+]
Database links
Mature ath-miR164c-5p
| Accession | MIMAT0001017 |
| Description | Arabidopsis thaliana ath-miR164c-5p mature miRNA |
| Sequence | 10 - AUGGAGAAGCAGGGCACGUGC - 30 |
| Evidence |
experimental
454 [2], Illumina [3] |
Mature ath-miR164c-3p
| Accession | MIMAT0031916 |
| Description | Arabidopsis thaliana ath-miR164c-3p mature miRNA |
| Sequence | 74 - CACGUGUUCUACUACUCCAACA - 95 |
| Evidence | not_experimental |
References
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