miRBase entry: gga-mir-206

Stem-loop gga-mir-206

Accession

MI0001207

Description

Gallus gallus gga-mir-206 precursor miRNA

Literature search

53 open access papers mention gga-mir-206
(278 sentences)

Sequence

141519 reads, 342.0 reads per million, 166 experiments

gagaugacaugcuucuuuauauccccauauggauuaggcugcuaUGGAAUGUAAGGAAGUGUGUGGUuucagggag
(((((.((((((((((((((((..((((((((......))).))))).)))))))))))))))).)))))......

Structure

------     g                cc     -   au 
      gagau acaugcuucuuuauau  ccaua ugg  u
      ||||| ||||||||||||||||  ||||| |||   
      cuuUG UGUGUGAAGGAAUGUA  GGUau guc  a
gaggga     G                -A     c   gg

Annotation confidence Not enough data

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Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context

3: 107387543-107387618 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-206

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gga-miR-206-3p

Accession	MIMAT0001139
Description	Gallus gallus gga-miR-206-3p mature miRNA
Sequence	45 - UGGAAUGUAAGGAAGUGUGUGGU - 67
Evidence	not_experimental
Database links
Predicted targets

References

PubMed ID: 15592404
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
"International Chicken Genome Sequencing Consortium"
"Nature (2004) 432:695-716