Stem-loop gga-mir-146a

Accession

MI0001235

Description

Gallus gallus gga-mir-146a precursor miRNA

Literature search

19 open access papers mention gga-mir-146a
(63 sentences)

Sequence

113519 reads, 1662 reads per million, 5 experiments

guguauccucagcuuUGAGAACUGAAUUCCAUGGGUUguaauugaauccuuugucagACCCAUGGGGCUCAGUUCUUCAGcuuggauauuucugucuuc
..((((((..((((..(((((((((.(((((((((((.....(((........)))))))))))))).))))))))).)))).))))))..........

Structure

--------gu      uc    uU         A           guaau   auc 
          guaucc  agcu  GAGAACUGA UUCCAUGGGUU     uga   c
          ||||||  ||||  ||||||||| |||||||||||     |||    
          uauagg  ucGA  UUCUUGACU GGGGUACCCAg     acu   u
cuucugucuu      -u    -C         C           -----   guu 

Annotation confidence High

Genome context

chr13: 7795767-7795865 [-]

Mature gga-miR-146a-5p

• Accession: MIMAT0001163
• Description: Gallus gallus gga-miR-146a-5p mature miRNA
• Sequence: 16 - UGAGAACUGAAUUCCAUGGGUU - 37
• Evidence: experimental ; Illumina [2]

Mature gga-miR-146a-3p

• Accession: MIMAT0026529
• Description: Gallus gallus gga-miR-146a-3p mature miRNA
• Sequence: 58 - ACCCAUGGGGCUCAGUUCUUCAG - 80
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45