Stem-loop gga-mir-124b

Accession

MI0001252

Description

Gallus gallus gga-mir-124b precursor miRNA

Literature search

13 open access papers mention gga-mir-124b
(39 sentences)

Sequence

601 reads, 2.0 reads per million, 31 experiments

agccccagcguuuuGUGUUCACUGCAGACCUUGAUUUaaugucacacgaUUAAGGCACGCAGUGAAUGCCAaaguuuggggcagccugggcug
.(((((((..(((.(((((((((((...((((((((...........))))))))...))))))))))).)))..)))))))(((....))).

Structure

----------a       cg   u           AGA        Uaau 
           gccccag  uuu GUGUUCACUGC   CCUUGAUU    g
           |||||||  ||| |||||||||||   ||||||||    u
           cgggguu  aaA CGUAAGUGACG   GGAAUUag    c
gucggguccga       ug   C           CAC        caca 

Annotation confidence Medium

Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context

23: 2590021-2590113 [+]

Mature gga-miR-124b-5p

• Accession: MIMAT0061614
• Description: Gallus gallus gga-miR-124b-5p mature miRNA
• Sequence: 15 - GUGUUCACUGCAGACCUUGAUUU - 37
• Evidence: experimental ; Illumina [1]

Mature gga-miR-124b-3p

• Accession: MIMAT0001174
• Description: Gallus gallus gga-miR-124b-3p mature miRNA
• Sequence: 50 - UUAAGGCACGCAGUGAAUGCCA - 71
• Evidence: not_experimental

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716