Stem-loop gga-mir-196-3

Accession

MI0001282

Description

Gallus gallus gga-mir-196-3 precursor miRNA

Literature search

7 open access papers mention gga-mir-196-3
(10 sentences)

Sequence

429157 reads, 207.0 reads per million, 200 experiments

uuucaugcagcugaucugugguuUAGGUAGUUUCAUGUUGUUGGGauuggcuuuuagcUCGGCAACAAGAAACUGCCUUAauuacgucaguuagucuucaucaagggc
........(((((((..((((((.((((((((((.((((((((((.(((.....))))))))))))).)))))))))).))))))))))))).(((((.....)))))

Structure

--------uuucaugc       cu      U          A          a   g 
                agcugau  gugguu AGGUAGUUUC UGUUGUUGGG uug c
                |||||||  |||||| |||||||||| |||||||||| ||| u
                uugacug  cauuaA UCCGUCAAAG ACAACGGCUc gau u
cgggaacuacuucuga       --      U          A          -   u 

Annotation confidence High

Genome context

34: 856403-856510 [-]

Mature gga-miR-196-5p

• Accession: MIMAT0001121
• Description: Gallus gallus gga-miR-196-5p mature miRNA
• Sequence: 24 - UAGGUAGUUUCAUGUUGUUGGG - 45
• Evidence: experimental ; cloned [2]

Mature gga-miR-196-3-3p

• Accession: MIMAT0051203
• Description: Gallus gallus gga-miR-196-3-3p mature miRNA
• Sequence: 59 - UCGGCAACAAGAAACUGCCUUA - 80
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: