Stem-loop gga-mir-196-3

Accession

MI0001282

Description

Gallus gallus gga-mir-196-3 precursor miRNA

Gene family

MIPF0000031; mir-196

Literature search

6 open access papers mention gga-mir-196-3
(9 sentences)

Sequence

153615 reads, 2177 reads per million, 5 experiments

uuucaugcagcugaucugugguuUAGGUAGUUUCAUGUUGUUGGgauuggcuuuuagcucggcaacaagaaacugccuuaauuacgucaguuagucuucaucaagggc
........(((((((..((((((.((((((((((.((((((((((.(((.....))))))))))))).)))))))))).))))))))))))).(((((.....)))))

Structure

--------uuucaugc       cu      U          A          a   g 
                agcugau  gugguu AGGUAGUUUC UGUUGUUGGg uug c
                |||||||  |||||| |||||||||| |||||||||| ||| u
                uugacug  cauuaa uccgucaaag acaacggcuc gau u
cgggaacuacuucuga       --      u          a          -   u 

Annotation confidence Not enough data

Genome context

chr33: 1025337-1025444 [+]

Mature gga-miR-196-5p

• Accession: MIMAT0001121
• Description: Gallus gallus gga-miR-196-5p mature miRNA
• Sequence: 24 - UAGGUAGUUUCAUGUUGUUGG - 44
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: