Stem-loop gga-mir-9-2

Accession

MI0001283

Description

Gallus gallus gga-mir-9-2 precursor miRNA

Literature search

25 open access papers mention gga-mir-9-2
(351 sentences)

Sequence

30172726 reads, 13619.0 reads per million, 248 experiments

ggaagcgaguuguuaUCUUUGGUUAUCUAGCUGUAUGAguguuuuggucuucAUAAAGCUAGAUAACCGAAAGUAaaaacuccuuca
.((((.(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).))))))))).

Structure

g    c     g    C               G      u uu 
 gaag gaguu uuaU UUUGGUUAUCUAGCU UAUGAg g  u
 |||| ||||| |||| ||||||||||||||| |||||| |  u
 cuuc cucaa aAUG AAGCCAAUAGAUCGA AUAcuu c  g
a    -     a    A               A      - ug 

Annotation confidence High

Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context

Z: 61287830-61287916 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-9-2

Mature gga-miR-9-5p

• Accession: MIMAT0001195
• Description: Gallus gallus gga-miR-9-5p mature miRNA
• Sequence: 16 - UCUUUGGUUAUCUAGCUGUAUGA - 38
• Evidence: not_experimental

Mature gga-miR-9-2-3p

• Accession: MIMAT0061074
• Description: Gallus gallus gga-miR-9-2-3p mature miRNA
• Sequence: 53 - AUAAAGCUAGAUAACCGAAAGUA - 75
• Evidence: not_experimental

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716