Stem-loop dps-mir-1

Accession

MI0001289

Description

Drosophila pseudoobscura dps-mir-1 precursor miRNA

Literature search

2 open access papers mention dps-mir-1
(6 sentences)

Sequence

22933959 reads, 135840.0 reads per million, 22 experiments

gccuuugagaguuCCAUGCUUCCUUGCAUUCAAUAguauaacauaaagcauaUGGAAUGUAAAGAAGUAUGGAGcgaaaucuggcaag
(((.......((((((((((((.((((((((.(((((..........)).))).)))))))).)))))))))))).......)))...

Structure

---   uuugaga            C        A   -  auaa 
   gcc       guuCCAUGCUUC UUGCAUUC AUA gu    c
   |||       |||||||||||| |||||||| ||| ||     
   cgg       cGAGGUAUGAAG AAUGUAAG Uau cg    a
gaa   ucuaaag            A        G   a  aaau 

Annotation confidence High

Genome context

ref|NC_046681.1|: 25707369-25707456 [-]

Mature dps-miR-1-5p

• Accession: MIMAT0053358
• Description: Drosophila pseudoobscura dps-miR-1-5p mature miRNA
• Sequence: 14 - CCAUGCUUCCUUGCAUUCAAUA - 35
• Evidence: not_experimental

Mature dps-miR-1-3p

• Accession: MIMAT0001199
• Description: Drosophila pseudoobscura dps-miR-1-3p mature miRNA
• Sequence: 53 - UGGAAUGUAAAGAAGUAUGGAG - 74
• Evidence: not_experimental

References