Stem-loop dps-mir-2c

Accession

MI0001294

Description

Drosophila pseudoobscura dps-mir-2c precursor miRNA

Literature search

3 open access papers mention dps-mir-2c
(13 sentences)

Sequence

1978288 reads, 12734.0 reads per million, 22 experiments

ugguauccuuacuuucagugUCAUCAAAAAUGGCUGAAGAaagauauauuugcauuugaagcgUAUCACAGCCAGCUUUGAUGGGCauugcaaugagcaucga
((((...((((.((.(((((((((((((..((((((......(((((.(((.......))).))))).))))))..)))))).))))))).)))))).)))).

Structure

-    auc    c  u       -      AA      AAGAaa     a   gc 
 uggu   cuua uu cagugUC AUCAAA  UGGCUG      gauau uuu  a
 ||||   |||| || ||||||| ||||||  ||||||      ||||| |||  u
 gcua   gagu aa guuaCGG UAGUUU  ACCGAC      CUAUg gaa  u
a    --c    -  c       G      CG      -----A     c   gu 

Annotation confidence High

Genome context

ref|NC_046679.1|: 10185065-10185167 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-mir-2c

Mature dps-miR-2c-5p

• Accession: MIMAT0053363
• Description: Drosophila pseudoobscura dps-miR-2c-5p mature miRNA
• Sequence: 21 - UCAUCAAAAAUGGCUGAAGA - 40
• Evidence: not_experimental

Mature dps-miR-2c-3p

• Accession: MIMAT0001202
• Description: Drosophila pseudoobscura dps-miR-2c-3p mature miRNA
• Sequence: 64 - UAUCACAGCCAGCUUUGAUGGGC - 86
• Evidence: not_experimental

References