Accession
MI0001392
Description
Caenorhabditis briggsae
cbr-mir-64a precursor miRNA
Sequence
ucaagaauccucggccucgccgacCAUGACACUGAAGCGUGUACGGAuggaaaguugaagccuuccguuccgcuagugugccaugcaacggcgagugccuuggcacuuug
.((((...((..((((((((((..((((.(((...((((.(.(((((.((..........)).))))).)))))...))).))))...))))))).)))..))...))))
.((((...((..((((((((((..((((.(((...((((.(.(((((.((..........)).))))).)))))...))).))))...))))))).)))..))...))))
Structure
u aau uc - -ac A UGA U U u aaag caag cc ggc cucgccg CAUG CAC AGCG G ACGGA gg u |||| || ||| ||||||| |||| ||| |||| | ||||| || guuu gg ccg gagcggc guac gug ucgc c ugccu cc u - cac uu u aac c uga - u u gaag
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 3 positions.
Genome context
chrIII: 869205-869314 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from cbr-mir-64a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-64a
| Accession | MIMAT0001292 |
| Description | Caenorhabditis briggsae cbr-miR-64a mature miRNA |
| Sequence | 25 - CAUGACACUGAAGCGUGUACGGA - 47 |
| Evidence | not_experimental |
References
|
