Accession
MI0001396
Description
Caenorhabditis briggsae
cbr-mir-83 precursor miRNA
Sequence
400
reads,
44.0
reads per million, 3 experiments
gcagaaggcaccacucgaaaaaACUGAGUUUAUGUGUGUACUUGAcggcgaucagagcaacgaucUAGCACCAUAUAAAUUCAGUGUuuucguggacagagagccaaguuu
......(((.((((..(((((.((((((((((((((.((.((.((((((.......))..)).)).)).)))))))))))))))).))))))))).......)))......
......(((.((((..(((((.((((((((((((((.((.((.((((((.......))..)).)).)).)))))))))))))))).))))))))).......)))......
Structure
gcagaa ------a uc a U A U - -- ga
ggc ccac gaaaa ACUGAGUUUAUGUG GU CU GA cg gc u
||| |||| ||||| |||||||||||||| || || || || || c
ccg ggug cuuuU UGACUUAAAUAUAC CA GA cu gc cg a
uuugaa agagaca -- G - C U a aa ag
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 2 positions at the 3' end.
Genome context
chrIV: 11660087-11660197 [-]
Database links
Mature cbr-miR-83-5p
| Accession | MIMAT0053553 |
| Description | Caenorhabditis briggsae cbr-miR-83-5p mature miRNA |
| Sequence | 23 - ACUGAGUUUAUGUGUGUACUUGA - 45 |
| Evidence | not_experimental |
Mature cbr-miR-83-3p
| Accession | MIMAT0001295 |
| Description | Caenorhabditis briggsae cbr-miR-83-3p mature miRNA |
| Sequence | 66 - UAGCACCAUAUAAAUUCAGUGU - 87 |
| Evidence | not_experimental |
References
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