Accession
MI0001401
Description
Caenorhabditis briggsae
cbr-mir-253 precursor miRNA
Sequence
2685
reads,
289.0
reads per million, 3 experiments
aacauuuuucgaguuucagucCUUCUCACACACCUCACUAACAcuaacuacagauuucuagaugUUAGUAGGCGUUGUGGGAAGGGcggagaugacgaauacuuugugca
.(((...((((.(((((.(((((((((((((.(((.((((((((((............))).)))))))))).).)))))))))))).)))))..)))).....)))...
.(((...((((.(((((.(((((((((((((.(((.((((((((((............))).)))))))))).).)))))))))))).)))))..)))).....)))...
Structure
--a --uuu -a a - A C - acuac aca uucg guuuc gucCUUCUCACA C CCU ACUAACA cua a ||| |||| ||||| |||||||||||| | ||| ||||||| ||| ugu aagc uagag cGGGAAGGGUGU G GGA UGAUUgu gau g acg uucau ag g U C - a cuuua
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 2 positions.
Genome context
chrV: 11596481-11596590 [-]
Database links
Mature cbr-miR-253-5p
| Accession | MIMAT0053554 |
| Description | Caenorhabditis briggsae cbr-miR-253-5p mature miRNA |
| Sequence | 22 - CUUCUCACACACCUCACUAACA - 43 |
| Evidence | not_experimental |
Mature cbr-miR-253-3p
| Accession | MIMAT0001299 |
| Description | Caenorhabditis briggsae cbr-miR-253-3p mature miRNA |
| Sequence | 65 - UUAGUAGGCGUUGUGGGAAGGG - 86 |
| Evidence | not_experimental |
References
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