Accession
MI0001402
Description
Caenorhabditis briggsae
cbr-mir-70 precursor miRNA
Sequence
42847
reads,
4437.0
reads per million, 3 experiments
aaaacggauguaucucuAGGAACAGCCAUCAUGUAAGACAuuucuaacugaaagaugUAAUACGUGAUUGGUGUUCCCAGaguuuaccguuuccuucuuuuauuuuuccaaa
.((((((......((((.((((((.(.((((((((..(((((((.....))..)))))..)))))))).).)))))).))))....))))))....................
.((((((......((((.((((((.(.((((((((..(((((((.....))..)))))..)))))))).).)))))).))))....))))))....................
Structure
-------------------a auguau A G C AG -- u
aaacgg cucu GGAACA C AUCAUGUA ACAuu uc a
|||||| |||| |||||| | |||||||| ||||| || a
uuugcc gaGA CCUUGU G UAGUGCAU Uguag ag c
aaaccuuuuuauuuucuucc --auuu C G U AA aa u
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 4 positions.
Genome context
chrV: 12360146-12360257 [-]
Database links
Mature cbr-miR-70-5p
| Accession | MIMAT0053555 |
| Description | Caenorhabditis briggsae cbr-miR-70-5p mature miRNA |
| Sequence | 18 - AGGAACAGCCAUCAUGUAAGACA - 40 |
| Evidence | not_experimental |
Mature cbr-miR-70-3p
| Accession | MIMAT0001300 |
| Description | Caenorhabditis briggsae cbr-miR-70-3p mature miRNA |
| Sequence | 58 - UAAUACGUGAUUGGUGUUCCCAG - 80 |
| Evidence | not_experimental |
References
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