Accession
MI0001407
Description
Caenorhabditis briggsae
cbr-mir-249 precursor miRNA
Sequence
auuuguuauuuugugcgcccucaaugcuacuagcaacgcucaaaaaucacuguacgacaaaugacuauauuuugUCACAGGAUUUUUGAGUGUUGCuagucggagaagg
..................(((...(.(.((((((((((((((((((((.((((..((((((.........)))))))))))))))))))))))))))))).).)..)))
..................(((...(.(.((((((((((((((((((((.((((..((((((.........)))))))))))))))))))))))))))))).).)..)))
Structure
auuuguuauuuugugcgc caa g u a ac uga
ccu u c acuagcaacgcucaaaaauc cugu gacaaa c
||| | | |||||||||||||||||||| |||| |||||| u
gga a g ugauCGUUGUGAGUUUUUAG GACA CUguuu a
------------------ -ag g c - -- uau
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 2 positions.
Genome context
chrX: 8056749-8056857 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cbr-mir-249
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-249
| Accession | MIMAT0001305 |
| Description | Caenorhabditis briggsae cbr-miR-249 mature miRNA |
| Sequence | 75 - UCACAGGAUUUUUGAGUGUUGC - 96 |
| Evidence | not_experimental |
References
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