Accession
MI0001408
Description
Caenorhabditis briggsae
cbr-mir-240 precursor miRNA
Sequence
cgcugucuuuauuuugaaacuguuuucaaaucgagaauuucgaggccugaaugcaagaaccguuuugagcaUACUGGCCUCCAAAUUUUCGCUuugaauuuuaguuacgcgug
(((.((...........(((((..((((((.(((((((((.((((((.(.((((..(((....)))..)))).).)))))).))))))))).))))))...))))))))))..
(((.((...........(((((..((((((.(((((((((.((((((.(.((((..(((....)))..)))).).)))))).))))))))).))))))...))))))))))..
Structure
-- u cuuuauuuuga -uu u c u a aa c cgc gu aacug uucaaa cgagaauuu gaggcc g augc gaa c ||| || ||||| |||||| ||||||||| |||||| | |||| ||| gcg ca uugau aaguuU GCUUUUAAA CUCCGG C Uacg uuu g gu - ----------- uuu C C U A ag u
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 2 positions.
Genome context
chrX: 13610687-13610799 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-240
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-240
| Accession | MIMAT0001306 |
| Description | Caenorhabditis briggsae cbr-miR-240 mature miRNA |
| Sequence | 72 - UACUGGCCUCCAAAUUUUCGCU - 93 |
| Evidence | not_experimental |
References
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