Accession
MI0001410
Description
Caenorhabditis briggsae
cbr-mir-239b precursor miRNA
Sequence
uaggacagacaugcaauuuUUGUACUGCACAAAAGUACUGacuauuucucagcgcuuuuguccagugcaagaauggcaagagcugguccauuuuuuuagggauuaaacaauu
..((((((...(((.((((((((((((.((((((((.((((.......)))).)))))))).)))))))))))).)))....)).)))).......................
..((((((...(((.((((((((((((.((((((((.((((.......)))).)))))))).)))))))))))).)))....)).)))).......................
Structure
---------------------ua - -aca a C A cu
ggac ag ugc auuuUUGUACUG ACAAAAGU CUGa a
|||| || ||| |||||||||||| |||||||| |||| u
ccug uc acg uaagaacgugac uguuuucg gacu u
uuaacaaauuagggauuuuuuua g gaga g c c cu
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 1 position.
Genome context
chrX: 15211379-15211490 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-239b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-239b
| Accession | MIMAT0001308 |
| Description | Caenorhabditis briggsae cbr-miR-239b mature miRNA |
| Sequence | 20 - UUGUACUGCACAAAAGUACUG - 40 |
| Evidence | not_experimental |
References
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