Stem-loop cbr-mir-62

Accession

MI0001411

Description

Caenorhabditis briggsae cbr-mir-62 precursor miRNA

Sequence

cccuugcaacucggcuauuauaagguggguuagaucccauauccuuccgcuugauggaaaUGAUAUGUAAUCUAGCUUACAGgucucucaacaucuccaagacggugcua
.....((......)).........(((((((((((..((((((.(((((.....)))))..))))))..)))))))))))...........((((........))))...

Structure

------cccuugcaacucggcuauuauaag           cc      -c     c 
                              guggguuagau  cauauc  uuccg u
                              |||||||||||  ||||||  ||||| u
                              CAUUCGAUCUA  GUAUAG  aaggu g
aucguggcagaaccucuacaacucucugGA           AU      Ua     a 

Annotation confidence Low

Comments

This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.

Genome context

chrX: 14298358-14298467 [-]

Mature cbr-miR-62

• Accession: MIMAT0001309
• Description: Caenorhabditis briggsae cbr-miR-62 mature miRNA
• Sequence: 61 - UGAUAUGUAAUCUAGCUUACAG - 82
• Evidence: not_experimental

References

1. PubMed ID: 12672692
   The microRNAs of Caenorhabditis elegans
   "Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, Rhoades MW, Burge CB, Bartel DP"
   "Genes Dev (2003) 17:991-1008