Accession
MI0001414
Description
Caenorhabditis briggsae
cbr-mir-354 precursor miRNA
Sequence
ccagagccgacuaagugccuuggugcggcuacagacggguauccggcucgauguucauacaccgcgacucuuuccuuuuACCUUGUUUGUUGCUGCUCCUuuugguuuu
..((((((((...........((.(((((.(((((((((((...(((.((.(((....))).)).).......))...)))).))))))).))))).))..))))))))
..((((((((...........((.(((((.(((((((((((...(((.((.(((....))).)).).......))...)))).))))))).))))).))..))))))))
Structure
cc cuaagugccuu u u - ucc ------- u a u agagccga gg gcggc acagacg ggua gg c cg ugu c |||||||| || ||||| ||||||| |||| || | || ||| uuuugguu CC CGUCG UGUUUGU CCAu cc g gc aca a -- ---------uU U U U uuu uuucuca c c u
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.
Genome context
chrI: 15400915-15401023 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-354
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-354
| Accession | MIMAT0001312 |
| Description | Caenorhabditis briggsae cbr-miR-354 mature miRNA |
| Sequence | 80 - ACCUUGUUUGUUGCUGCUCCU - 100 |
| Evidence | not_experimental |
References
|
