Accession
MI0001419
Description
Caenorhabditis briggsae
cbr-mir-39 precursor miRNA
Sequence
cagagaugcagggagcccaacugguucucacugcagugauaagcuauguuacagucuaUCACCGGGUGAAAAACGGUUAGgcucuuuaagcaucucug
(((((((((((((((((.(((((..(.(((((...((((((.(((.......))).))))))..))))).)..))))).))))))))..)))))))))
(((((((((((((((((.(((((..(.(((((...((((((.(((.......))).))))))..))))).)..))))).))))))))..)))))))))
Structure
-- c gu c gca a au
cagagaugc agggagcc aacug u ucacu gugaua gcu g
||||||||| |||||||| ||||| | ||||| |||||| ||| u
gucucuacg uuucucgG UUGGC A AGUGG CACUau uga u
aa A AA A -GC c ca
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 5 positions at the 3' end.
Genome context
chrII: 8377829-8377926 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from cbr-mir-39
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-39
| Accession | MIMAT0001316 |
| Description | Caenorhabditis briggsae cbr-miR-39 mature miRNA |
| Sequence | 59 - UCACCGGGUGAAAAACGGUUAG - 80 |
| Evidence | not_experimental |
References
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