Dead hairpin entry

Stem-loop osa-MIR414

Accession

MI0001434

Description

Oryza sativa osa-MIR414 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

21 open access papers mention osa-MIR414
(91 sentences)

Sequence

1106 reads, 7.0 reads per million, 77 experiments

guugccgcugccGUCAUCCUCAUCAUCAUCguccuugcaugaaaccgccagcaaauccuugcgcggggggagggggAAGGGGAGGGGGAGGGGucggaggggcggc
((((((.((.(((((.(((((.((.((.((.(((((.(......((((..((((....)))))))).).))))).)).)).)).)))))..)).))))).))))))

Structure

      g  g   -  -A     A  A  A  g     g augaaa    ca    a 
guugcc cu ccG UC  UCCUC UC UC UC uccuu c      ccgc  gcaa u
|||||| || ||| ||  ||||| || || || ||||| |      ||||  ||||  
cggcgg ga ggc GG  AGGGG AG GG Ag gggag g      ggcg  cguu c
      g  -   u  GG     G  G  A  g     g -----g    --    c