miRBase entry: osa-MIR415

Dead hairpin entry

Stem-loop osa-MIR415


Accession
MI0001435
Description
Oryza sativa osa-MIR415 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
6 open access papers mention osa-MIR415
(6 sentences)

Sequence

100 reads, 2.0 reads per million, 28 experiments
agagaguuuuacagagcagaAACAGAACAGAAGCAGAGCAGcuguguauacacaacacugcaacuaucccuaucacugagggacaaagcagaaaccagcugagcucuccuuggcugucuguacaagcaaagcaaaagcuucaag
.....((((((((((.(((...........(((.((((((((((.((..........((((.....(((((.......)))))....))))..)))))))..))))).)))..))))))))).)))).((((....))))....

Structure
------------agaga    -      g   aAACAGAACAG   C     --     u  auacacaaca    aacua     au 
                 guuu uacaga cag           AAG AGAGC  AGcug gu          cugc     ucccu  c
                 |||| |||||| |||           ||| |||||  ||||| ||          ||||     |||||  a
                 cgaa augucu guc           uuc ucucg  ucgac ca          gacg     aggga  c
gaacuucgaaaacgaaa    c      -   ---------gg   c     ag     -  --------aa    -aaac     gu