miRBase entry: osa-MIR416

Dead hairpin entry

Stem-loop osa-MIR416


Accession
MI0001436
Description
Oryza sativa osa-MIR416 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
4 open access papers mention osa-MIR416
(6 sentences)

Sequence

500 reads, 3.0 reads per million, 49 experiments
gaugaggaguaugaauagaaagaauuagaaaaGCUACGGUGGUUGUUGAGCAGCGCCaaaaaaaacucugcuuugcucuguuucuguGUUCGUCCGUACACUGUUCAUC
((((((.((((((((((...((((.(((((((((...((((.((((...))))))))............)))))..)))).)))).)))))))......))).))))))

Structure
      g   ------       gaa    u    --     ---------UAC    G    U 
gaugag agu      augaaua   agaa uaga  aaaGC            GGUG UUGU  
|||||| |||      |||||||   |||| ||||  |||||            |||| |||| G
CUACUU UCA      UGCUUGu   ucuu gucu  uuucg            CCGC GACG  
      G   CAUGCC       --g    u    cg     ucucaaaaaaaa    -    A