Stem-loop xla-mir-429-1

Accession

MI0001451

Description

Xenopus laevis xla-mir-429-1 precursor miRNA

Literature search

2 open access papers mention xla-mir-429-1
(2 sentences)

Sequence

9397 reads, 290.0 reads per million, 18 experiments

auGUCUUACCAGACAAGGUUAGAUcuaguuacucucgucUAAUACUGUCUGGUAAUGCCGU
..((.((((((((((..(((((((..((.....)).)))))))..)))))))))).))...

Structure

-au  C          AG       cu  u 
   GU UUACCAGACA  GUUAGAU  ag u
   || ||||||||||  |||||||  || a
   CG AAUGGUCUGU  UAAUcug  uc c
UGC  U          CA       -c  u 

Annotation confidence High

Genome context

chr7L: 78948298-78948358 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-429-1

Mature xla-miR-429-5p

• Accession: MIMAT0046601
• Description: Xenopus laevis xla-miR-429-5p mature miRNA
• Sequence: 3 - GUCUUACCAGACAAGGUUAGAU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-429-3p

• Accession: MIMAT0001346
• Description: Xenopus laevis xla-miR-429-3p mature miRNA
• Sequence: 40 - UAAUACUGUCUGGUAAUGCCGU - 61
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15642338
   Stage-specific expression of microRNAs during Xenopus development
   "Watanabe T, Takeda A, Mise K, Okuno T, Suzuki T, Minami N, Imai H"
   "FEBS Lett (2005) 579:318-324