Stem-loop xla-mir-133a-1

Accession

MI0001455

Description

Xenopus laevis xla-mir-133a-1 precursor miRNA

Literature search

2 open access papers mention xla-mir-133a-1
(5 sentences)

Sequence

1679044 reads, 43637.0 reads per million, 17 experiments

cagugcuuugcuaaAGCUGGUAAAAUGGAACCAAAucaccucuucaauggauUUGGUCCCCUUCAACCAGCUGUaggauugcauug
((((((..(.(((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))).)..))))))

Structure

      uu g   a       AA  U  A        accuc 
cagugc  u cua AGCUGGU  AA GG ACCAAAuc     u
||||||  | ||| |||||||  || || ||||||||      
guuacg  a gaU UCGACCA  UU CC UGGUUuag     u
      uu g   G       AC  C  C        guaac 

Annotation confidence High

Genome context

chr6S: 78981006-78981091 [-]

Mature xla-miR-133a-5p

• Accession: MIMAT0052065
• Description: Xenopus laevis xla-miR-133a-5p mature miRNA
• Sequence: 15 - AGCUGGUAAAAUGGAACCAAA - 35
• Evidence: experimental ; cloned [1]

Mature xla-miR-133a-3p

• Accession: MIMAT0001350
• Description: Xenopus laevis xla-miR-133a-3p mature miRNA
• Sequence: 53 - UUGGUCCCCUUCAACCAGCUGU - 74
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15642338
   Stage-specific expression of microRNAs during Xenopus development
   "Watanabe T, Takeda A, Mise K, Okuno T, Suzuki T, Minami N, Imai H"
   "FEBS Lett (2005) 579:318-324