Stem-loop oar-mir-431

Accession

MI0001520

Description

Ovis aries oar-mir-431 precursor miRNA

Literature search

8 open access papers mention oar-mir-431
(18 sentences)

Sequence

69959 reads, 82.0 reads per million, 136 experiments

cguccugcgaggUGUCUUGCAGGCCGUCAUGCAGGccacacugacggaaacguUGCAGGUCGUCUUGCAGGGCGUcucgcaagacgacaca
((((.((((((((((((((((((.((.(.((((..........(((....))))))).).)).)))))))))))))))))).)))).....

Structure

-----    c                  C  U A    GGccacacug   g 
     cguc ugcgaggUGUCUUGCAGG CG C UGCA          acg a
     |||| |||||||||||||||||| || | ||||          |||  
     gcag acgcucUGCGGGACGUUC GC G ACGU          ugc a
acaca    a                  U  U G    ----------   a 

Annotation confidence High

Genome context

chr18: 64383338-64383428 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from oar-mir-431

Mature oar-miR-431-5p

• Accession: MIMAT0001414
• Description: Ovis aries oar-miR-431-5p mature miRNA
• Sequence: 13 - UGUCUUGCAGGCCGUCAUGCAGG - 35
• Evidence: experimental ; PCR [1]

Mature oar-miR-431-3p

• Accession: MIMAT0052509
• Description: Ovis aries oar-miR-431-3p mature miRNA
• Sequence: 54 - UGCAGGUCGUCUUGCAGGGCGU - 75
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 15854907
   RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus
   "Davis E, Caiment F, Tordoir X, Cavaille J, Ferguson-Smith A, Cockett N, Georges M, Charlier C"
   "Curr Biol (2005) 15:743-749