Stem-loop oar-mir-432

Accession

MI0001522

Description

Ovis aries oar-mir-432 precursor miRNA

Literature search

13 open access papers mention oar-mir-432
(59 sentences)

Sequence

358245 reads, 405.0 reads per million, 142 experiments

gcaugacuccuccaagUCUUGGAGUAGGUCAUUGGGUGGauccuuuauuucccuaugugggccaCUGGAUGGCUCCUCCAUGUCUuggcg
...........(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))..

Structure

gcaugacuccu     U U     UA       G     a   uu   uu 
           ccaag C UGGAG  GGUCAUU GGUGG ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguUC G ACCUC  UCGGUAG UCacc ggg  gua  c
---------gc     U U     -C       G     -   -u   uc 

Annotation confidence High

Genome context

chr18: 64386792-64386881 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from oar-mir-432

Mature oar-miR-432-5p

• Accession: MIMAT0001416
• Description: Ovis aries oar-miR-432-5p mature miRNA
• Sequence: 17 - UCUUGGAGUAGGUCAUUGGGUGG - 39
• Evidence: experimental ; PCR [1]

Mature oar-miR-432-3p

• Accession: MIMAT0052511
• Description: Ovis aries oar-miR-432-3p mature miRNA
• Sequence: 65 - CUGGAUGGCUCCUCCAUGUCU - 85
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 15854907
   RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus
   "Davis E, Caiment F, Tordoir X, Cavaille J, Ferguson-Smith A, Cockett N, Georges M, Charlier C"
   "Curr Biol (2005) 15:743-749