Accession
MI0001540
Description
Sorghum bicolor
sbi-MIR396c precursor miRNA
Gene family
MIPF0000047;
MIR396
Literature search
3 open access papers mention sbi-MIR396c
(9 sentences)
(9 sentences)
Sequence
uucaaguccaugccaugccuUUCCACAGCUUUCUUGAACUUcuccuccuccuccucucucuuagaaggguagcuuugaacaucucucucucucucucucucucucucucucucucuccaaagaaggucaagaaagcugugggaagaaaugacauaacaagga
......((((((.(((..(((((((((((((((((((.(((((.......(((((.(((...))).))).))....((.....))...................................))))).)))))))))))))))))))..))).))).....)))
......((((((.(((..(((((((((((((((((((.(((((.......(((((.(((...))).))).))....((.....))...................................))))).)))))))))))))))))))..))).))).....)))
Structure
uucaag ----- c gc A -----------------------------------------ccuccuc - c c
ucc aug cau cuUUCCACAGCUUUCUUGA CUUcu cu ccu ucu
||| ||| ||| ||||||||||||||||||| ||||| || ||| ||| u
agg uac gua gaagggugucgaaagaacu gaaga ga ggg aga
------ aacaa a aa g aaccucucucucucucucucucucucucucucucucucuacaaguuuc u a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr4: 66726748-66726909 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sbi-MIR396c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sbi-miR396c
| Accession | MIMAT0001436 |
| Description | Sorghum bicolor sbi-miR396c mature miRNA |
| Sequence | 21 - UUCCACAGCUUUCUUGAACUU - 41 |
| Evidence | not_experimental |
References
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