Stem-loop sbi-MIR399b

Accession

MI0001546

Description

Sorghum bicolor sbi-MIR399b precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

3 open access papers mention sbi-MIR399b
(6 sentences)

Sequence

uagcucagggugagaaucacagugcagcucuccucuggcaugaaggcugagagagucaugagcaguuuucuggccuuucccUGCCAAAGGAGAGCUGCCCUGccauucauuagcccugcaa
.....((((((..((((..(((.(((((((((((.(((((.(((((((.((((((.(.......))))))))))))))...))))).))))))))))).)))..))))....))))))...

Structure

uagcu      --ga    ca   u           c     --u       g      u au 
     cagggu    gaau  cag gcagcucuccu uggca   gaaggcu agagag c  g
     ||||||    ||||  ||| ||||||||||| |||||   ||||||| |||||| |  a
     gucccg    cuua  GUC CGUCGAGAGGA ACCGU   uuuccgg ucuuuu g  g
--aac      auua    cc   C           A     ccc       -      - ac 

Annotation confidence Not enough data

Genome context

chr4: 9764453-9764573 [-]

Mature sbi-miR399b

• Accession: MIMAT0001442
• Description: Sorghum bicolor sbi-miR399b mature miRNA
• Sequence: 82 - UGCCAAAGGAGAGCUGCCCUG - 102
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13