Stem-loop ame-mir-210

Accession

MI0001581

Description

Apis mellifera ame-mir-210 precursor miRNA

Literature search

7 open access papers mention ame-mir-210
(9 sentences)

Sequence

20963 reads, 366.0 reads per million, 24 experiments

uggacccuaaugcAGCUGCUGGCCACUGCACAAGAUUagacauaagacucUUGUGCGUGUGACAGCGGCUAUgaugggguuucca
.((((((((....((((((((..((((((((((((((........)).))))))))).))).))))))))....))))))))...

Structure

--u        augc        GC   -         -  aga 
   ggacccua    AGCUGCUG  CAC UGCACAAGA UU   c
   ||||||||    ||||||||  ||| ||||||||| ||    
   uuuggggu    UCGGCGAC  GUG GCGUGUUcu ag   a
acc        agUA        -A   U         c  aau 

Annotation confidence High

Genome context

CM000055.5: 13831669-13831753 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-210

Mature ame-miR-210-5p

• Accession: MIMAT0053043
• Description: Apis mellifera ame-miR-210-5p mature miRNA
• Sequence: 14 - AGCUGCUGGCCACUGCACAAGAUU - 37
• Evidence: experimental ; RTPCR [1], Illumina [2-3]

Mature ame-miR-210-3p

• Accession: MIMAT0001477
• Description: Apis mellifera ame-miR-210-3p mature miRNA
• Sequence: 51 - UUGUGCGUGUGACAGCGGCUAU - 72
• Evidence: experimental ; RTPCR [1], Illumina [2-3]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


2. PubMed ID: 20491979
   Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
   "Behura SK, Whitfield CW"
   "Insect Mol Biol (2010) 19:431-439


3. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226