Stem-loop ame-mir-219

Accession

MI0001582

Description

Apis mellifera ame-mir-219 precursor miRNA

Literature search

2 open access papers mention ame-mir-219
(4 sentences)

Sequence

409 reads, 6.0 reads per million, 24 experiments

aauugaaugucucaggcaaUGAUUGUCCAAACGCAAUUCUUGucuaaacgguacgaaaucaAGAAUUGUGUGGGGACAUCAGCgcucgaggugcgauucaac
..(((((((((((.(((..((((.((((..((((((((((((.................))))))))))))..))))))))..))).)))..)).)))))).

Structure

aa      -  --   a   aa    U    AA            ucuaaac 
  uugaau gu  cuc ggc  UGAU GUCC  ACGCAAUUCUUG       g
  |||||| ||  ||| |||  |||| ||||  ||||||||||||       g
  aacuua cg  gag ucg  ACUA CAGG  UGUGUUAAGAac       u
-c      g  ug   c   CG    -    GG            uaaagca 

Annotation confidence High

Genome context

CM000057.5: 42977-43078 [-]

Mature ame-miR-219-5p

• Accession: MIMAT0001478
• Description: Apis mellifera ame-miR-219-5p mature miRNA
• Sequence: 20 - UGAUUGUCCAAACGCAAUUCUUG - 42
• Evidence: experimental ; RTPCR [1], Illumina [2]

Mature ame-miR-219-3p

• Accession: MIMAT0053044
• Description: Apis mellifera ame-miR-219-3p mature miRNA
• Sequence: 62 - AGAAUUGUGUGGGGACAUCAGC - 83
• Evidence: experimental ; RTPCR [1], Illumina [2]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


2. PubMed ID: 20491979
   Correlated expression patterns of microRNA genes with age-dependent behavioural changes in honeybee
   "Behura SK, Whitfield CW"
   "Insect Mol Biol (2010) 19:431-439