Stem-loop ame-mir-281

Accession

MI0001587

Description

Apis mellifera ame-mir-281 precursor miRNA

Literature search

7 open access papers mention ame-mir-281
(18 sentences)

Sequence

598482 reads, 7611.0 reads per million, 24 experiments

cgacgaaaggcgcgcgcuauaAAGAGAGCUAUCCAUCGACAGUaugguuauaauagacacUGUCAUGGAGUUGCUCUCUUUGuagacacugcuauguucaacg
((..(((.((((.(.((((((((((((((..(((((.((((((...(((......))))))))))))))...))))))))))))).).)))))...)))..))

Structure

  ac   --a    c c -             -UA     C      aug   au 
cg  gaa   ggcg g g cuauaAAGAGAGC   UCCAU GACAGU   guu  a
||  |||   |||| | | |||||||||||||   ||||| ||||||   |||   
gc  cuu   ucgu c c gauGUUUCUCUCG   AGGUA CUGUca   cag  a
  aa   gua    - a a             UUG     -      ---   au 

Annotation confidence High

Genome context

CM000054.5: 22275351-22275453 [-]

Mature ame-miR-281-5p

• Accession: MIMAT0053047
• Description: Apis mellifera ame-miR-281-5p mature miRNA
• Sequence: 22 - AAGAGAGCUAUCCAUCGACAGU - 43
• Evidence: experimental ; Illumina [1-2]

Mature ame-miR-281-3p

• Accession: MIMAT0001483
• Description: Apis mellifera ame-miR-281-3p mature miRNA
• Sequence: 61 - UGUCAUGGAGUUGCUCUCUUUG - 82
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226