Stem-loop ame-mir-315

Accession

MI0001592

Description

Apis mellifera ame-mir-315 precursor miRNA mir-315

Gene
family

RF00717; mir-315

Literature search

4 open access papers mention ame-mir-315
(5 sentences)

Sequence

160998 reads, 1957.0 reads per million, 24 experiments

gcucuuuaugcUUUUGAUUGUUGCUCAGAAAGCCuugauuaugauauuggCUUUCGGGCAAUAAUCAUAAUcacgaaagggu
(((((((.((.((.((((((((((((.(((((((..............))))))))))))))))))).)).))..)))))))

Structure

       -a  c  U            A       uugauu 
gcucuuu  ug UU UGAUUGUUGCUC GAAAGCC      a
|||||||  || || |||||||||||| |||||||       
ugggaaa  ac AA ACUAAUAACGGG CUUUCgg      u
       gc  U  U            -       uuauag 

Annotation confidence High

Genome context

CM000055.5: 9288851-9288932 [-]

Mature ame-miR-315-5p

• Accession: MIMAT0001487
• Description: Apis mellifera ame-miR-315-5p mature miRNA
• Sequence: 12 - UUUUGAUUGUUGCUCAGAAAGCC - 34
• Evidence: experimental ; Illumina [1-2]

Mature ame-miR-315-3p

• Accession: MIMAT0053052
• Description: Apis mellifera ame-miR-315-3p mature miRNA
• Sequence: 51 - CUUUCGGGCAAUAAUCAUAAU - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670


2. PubMed ID: 26853694
   MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
   "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
   "Insect Mol Biol (2016) 25:216-226