Stem-loop ame-mir-8

Accession

MI0001595

Description

Apis mellifera ame-mir-8 precursor miRNA

Literature search

16 open access papers mention ame-mir-8
(31 sentences)

Sequence

14738997 reads, 175312.0 reads per million, 24 experiments

ggaguaucuguucaCAUCUUACCGGGCAGCAUUAGAuugaaguugaccuucUAAUACUGUCAGGUAAAGAUGUCgucaggauucc
(((((.((((...((((((((((.(((((.((((((.............)))))).))))).))).)))))))...)))))))))

Structure

     a    uuc       -   G     C      uugaa 
ggagu ucug   aCAUCUU ACC GGCAG AUUAGA     g
||||| ||||   ||||||| ||| ||||| ||||||     u
ccuua ggac   UGUAGAA UGG CUGUC UAAUcu     u
     -    ugC       A   A     A      uccag 

Annotation confidence High

Genome context

CM000057.5: 12492063-12492147 [-]

Mature ame-miR-8-5p

• Accession: MIMAT0053055
• Description: Apis mellifera ame-miR-8-5p mature miRNA
• Sequence: 15 - CAUCUUACCGGGCAGCAUUAGA - 36
• Evidence: experimental ; SOLID [1], Illumina [2]

Mature ame-miR-8-3p

• Accession: MIMAT0001490
• Description: Apis mellifera ame-miR-8-3p mature miRNA
• Sequence: 52 - UAAUACUGUCAGGUAAAGAUGUC - 74
• Evidence: experimental ; SOLID [1], Illumina [2]

References

1. PubMed ID: 20807255
   Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
   "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
   "Insect Mol Biol (2010) 19:799-805


2. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670